the basename of the blast db files, relative to the root of the databases repository. A blast DB is usually composed of 3 files, all with a given basename, and with the extensions .pnin, .pnsq, and .pnhr.
title
varchar
80
null
type
varchar
80
null
source_url
varchar
255
√
null
lookup_url
varchar
255
√
null
update_freq
varchar
80
'monthly'::character varying
info_url
varchar
255
√
null
index_seqs
bool
1
true
corresponds to formatdb -o option. Set true if formatdb should be given a ‘-o T’. This is used only if you later want to fetch specific sequences out of this blast db.
((((update_freq)::text = 'daily'::text) OR ((update_freq)::text = 'weekly'::text) OR ((update_freq)::text = 'monthly'::text) OR ((update_freq)::text = 'manual'::text)))
blast_db_info_url_check
(((info_url IS NULL) OR ((info_url)::text ~ similar_escape('(ftp|http|https)://%'::text, NULL::text))))
blast_db_source_url_check
(((source_url IS NULL) OR ((source_url)::text ~ similar_escape('(ftp|http|https|cxgn-resource|file)://%'::text, NULL::text))))
blast_db_file_base_check
(((file_base)::text !~~ '/%'::text))
blast_db_lookup_url_check
(((lookup_url IS NULL) OR ((lookup_url)::text ~ similar_escape('(ftp|http|https)://%%s%'::text, NULL::text))))
blast_db_type_check
((((type)::text = 'protein'::text) OR ((type)::text = 'nucleotide'::text)))
