BreedBase

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Analyze
- Breeder Tools
- Selection Index
- Population Structure
- Clustering
- Kinship & Inbreeding
- Stability AMMI/GGE
- Heritability
- Accession Usage
- Mixed Models
- Compare Trials
- Graphical Filtering
- BoxPlotter Tool
- GWAS
- Image Analysis
- Sequence Analysis
- BLAST
- Other
- Ontology Browser
- Compose a New Trait
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Advanced

Notice: This is a demo site only. If you would like to use Breedbase, please contact lam87@cornell.edu.

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Cluster Analysis

Select a list or dataset and run cluster analysis using k-means and hierarchical methods

Select a population

Create a new list or dataset

Your Lists

Public Lists

List Contents

List Validation Report: Failed

Elements not found:

Optional: Add Missing Accessions to A List

Mismatched case

Click the Adjust Case button to align the case in the list with what is in the database.

Multiple mismatched case

Items listed here have mulitple case mismatches and must be fixed manually. If accessions need to be merged, contact the database directly.

List elements matching a synonym

Multiple synonym matches

Multiple synonym matches have to be resolved manually. Contact database administrators if necessary.

Fuzzy Search Results

Synonym Search Results

Create a New List from Unique Names:

Available Seedlots

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Create a New List from Selected Seedlots:

Manage Seedlots

Your Datasets

Public Datasets

Dataset Contents

Dataset Validation Failed

Elements not found:

Your Calendar

Having trouble viewing events on the calendar?
Are you associated with the breeding program you are interested in viewing?

Calendar Permissions

Add New Event

Project:

Event Type:

Start:

End:

Description:

Web URL:

http://www.

Event Info

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

Edit Event

Project:

Event Type:

Start:

End:

Description:

Web URL:

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Create New User

Notice

Before creating a new account, please check if you already have an account using the directory search.
A link will be emailed to you. Please click on it to activate the account.
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Organization:

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Email Address:

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Working

Progress

BREEDBASE is located at the Boyce Thompson Institute.

Version
c4286d2e0 sgn-358.0
Thu Jul 13 10:23:03 2023 -0400